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@qiime2

QIIME 2

Welcome to the QIIME 2 GitHub Organization! 👋

If you're a QIIME 2 user or developer, or are thinking about becoming one, refer to our Support Guidelines for details on how to learn or get help with QIIME 2.

If you're interested in contributing to repositories in the qiime2 GitHub organization, please start by reading our Contributing Guidelines.

This organization is primarily managed by the Caporaso Lab at Northern Arizona University, but has contributors from all over the world. If you have questions that aren't covered in the resources above, the best way to reach us is on the QIIME 2 Forum - it's where we hang out.

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  1. distributions distributions Public

    Makefile 5 11

  2. q2cli q2cli Public

    Command line interface for QIIME 2

    Python 20 30

  3. docs docs Public archive

    Python 21 60

Repositories

Showing 10 of 82 repositories
  • moving-pictures-tutorial Public

    Moving Pictures Tutorial source

    qiime2/moving-pictures-tutorial’s past year of commit activity
    Makefile 0 1 0 0 Updated Apr 23, 2026
  • gut-to-soil-tutorial Public

    The gut-to-soil axis microbiome analysis tutorial

    qiime2/gut-to-soil-tutorial’s past year of commit activity
    Makefile 1 4 3 0 Updated Apr 23, 2026
  • distributions Public
    qiime2/distributions’s past year of commit activity
    Makefile 5 BSD-3-Clause 11 4 1 Updated Apr 23, 2026
  • library Public

    A website for sharing QIIME 2 Plugins

    qiime2/library’s past year of commit activity
    Svelte 0 BSD-3-Clause 2 3 2 Updated Apr 23, 2026
  • library-catalog Public

    Stores a list of the repos that are included in the QIIME 2 library

    qiime2/library-catalog’s past year of commit activity
    0 BSD-3-Clause 10 2 1 Updated Apr 23, 2026
  • resources Public

    Source for QIIME 2 Resources page.

    qiime2/resources’s past year of commit activity
    TeX 1 BSD-3-Clause 4 2 0 Updated Apr 22, 2026
  • amplicon-docs Public

    Source for QIIME 2 amplicon documentation.

    qiime2/amplicon-docs’s past year of commit activity
    Makefile 1 2 6 0 Updated Apr 22, 2026
  • qiime2/action-library-packaging’s past year of commit activity
    Python 0 BSD-3-Clause 5 0 0 Updated Apr 21, 2026
  • qiime2/midpoint_check’s past year of commit activity
    Python 0 0 0 0 Updated Apr 17, 2026
  • q2view Public

    A web-based "serverless" viewer of QIIME 2 Artifacts and Visualizations

    qiime2/q2view’s past year of commit activity
    TypeScript 1 BSD-3-Clause 3 2 0 Updated Apr 17, 2026

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